PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009598817.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 552aa    MW: 60168.3 Da    PI: 7.2927
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009598817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.71.6e-30303361259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  XP_009598817.1 303 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGSHNHP 361
                     7*********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-33287363IPR003657WRKY domain
SuperFamilySSF1182901.01E-27295363IPR003657WRKY domain
PROSITE profilePS5081129.608297363IPR003657WRKY domain
SMARTSM007741.9E-36302362IPR003657WRKY domain
PfamPF031061.8E-26304361IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    Send to blast
MDKGWGLTLE NSSDKVGFFN NKPFFGFNLS PRLNNIKGGE MFSGAEFPAD EKRGMVNEVD  60
FFSEKKSIHD DVVVKKGNSQ GNNTMRTGLF VNTGLQLVTA NTGISDQSTV DDGISSEVEE  120
KRTKNEQLAQ LQVELERMNT ENQRLKGMLT QVTNSYSALQ MHLVTLMQQQ QQQQLISRTE  180
STHNHVVVEV KSEEKNQEKD GNIVPRQFME LGPSSTKADP MDEPTQSHST SEERTLSGSP  240
RNNMELSRDK AIGREESPES ESWVPNKVPK LMNSSKPVEQ TTEATMRKAR VSVRARSEAP  300
MISDGCQWRK YGQKMAKGNP CPRAYYRCTM AVGCPVRKQV QRCAEDRTIL ITTYEGSHNH  360
PLPPAAMAMA STTSAAANML LSGSMPSADG LMNTNFLART ILPCSSNMAT ISASAPFPTV  420
TLDLTQNPNA MSNYHQRNTA TQFQVPLPAG LNHPNFVGSM STPQIPQVLG QALYNQSRFS  480
GLQVSQDNIQ PPSFSDTLTA ATAAITADPN FTAALAAAIS SIIGGSHPNN GNNSTSGPTS  540
NSNKTSSFLG NQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-23289365176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009598817.10.0PREDICTED: probable WRKY transcription factor 31 isoform X1
SwissprotQ9C5191e-158WRKY6_ARATH; WRKY transcription factor 6
TrEMBLC7E5X80.0C7E5X8_CAPAN; Transcription factor WRKY
STRINGPGSC0003DMT4000424000.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9452492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-129WRKY family protein